| Reference: | Besemer J. and Borodovsky M., Heuristic approach to deriving models for gene finding, NAR, 1999, Vol. 27, No. 19, pp. 3911-3920. [ Download PDF ] |
The models used by GeneMark.hmm 2.0 and GeneMark 2.4 are derived from parameters measured from the input sequences and knowledge gained through the study of various bacterial genomes.These models have been shown to accurately predict genes in bacterial, viral and plasmid DNA sequences. Please note that email is the only way to receive output for sequences larger than 1 MB. UPDATE (June 1, 2001): Web site has been redesigned and moved a to new, more powerful server Listing of previous updates | |
Sequence title: SIO1 Length: 39898 bp G+C percentage: 46.18 %
GeneMark.hmm PROKARYOTIC (Version 2.1)
Sequence file name: sequence, RBS: N
Model file name: heuristic_no_rbs.mat
Model organism: Heuristic_model
Tue Mar 5 18:00:09 2002
Predicted genes
Gene Strand LeftEnd RightEnd Gene Class
# Length
1 + <3 56 54 1
2 + 441 851 411 1
3 + 820 1521 702 1
4 + 1581 2429 849 1
5 + 2531 3346 816 1
6 - 3161 4507 1347 1
7 - 4688 5254 567 1
8 - 5251 5661 411 1
9 - 5663 6256 594 1
10 - 6348 7970 1623 1
11 - 7972 8463 492 1
12 + 9334 9489 156 1
13 + 9486 10076 591 1
14 + 10100 10528 429 1
15 + 10831 10980 150 1
16 + 10980 11648 669 1
17 + 11645 11959 315 1
18 + 12008 12241 234 1
19 + 12234 12602 369 1
20 + 12595 12843 249 1
21 + 12831 13067 237 1
22 + 13069 13257 189 1
23 + 13387 14940 1554 1
24 + 14945 15166 222 1
25 + 15171 15518 348 1
26 + 15502 17244 1743 1
27 + 17261 17839 579 1
28 + 17832 18272 441 1
29 + 18265 19128 864 1
30 + 19118 19522 405 1
31 + 19515 19700 186 1
32 + 19693 19998 306 1
33 + 19995 20177 183 1
34 + 20174 22189 2016 1
35 + 22298 22534 237 1
36 + 22518 22967 450 1
37 + 23274 23672 399 1
38 + 23673 23861 189 1
39 - 23917 24057 141 1
40 - 24062 24316 255 1
41 - 24306 24566 261 1
42 - 24559 24897 339 1
43 - 24897 25088 192 1
44 - 25069 25671 603 1
45 - 25671 26453 783 1
46 - 26602 28359 1758 1
47 - 28362 32816 4455 1
48 - 32831 33265 435 1
49 - 33267 33725 459 1
50 - 33703 35850 2148 1
51 - 35819 36136 318 1
52 - 36123 36872 750 1
53 - 36874 37446 573 1
54 - 37564 38505 942 1
55 - 38518 39285 768 1
56 - 39288 39530 243 1
57 - 39527 39826 300 1
GENEMARK PREDICTIONS
Sequence: SIO1
Sequence file: gm_sequence
Sequence length: 39898
GC Content: 46.18%
Window length: 96
Window step: 12
Threshold value: 0.500
---
Matrix: Heuristic model
Matrix author: MB/JDB
Matrix order: 2
List of Open reading frames predicted as CDSs, shown with alternate starts
(regions from start to stop codon w/ coding function >0.50)
Left Right DNA Coding Avg Start
end end Strand Frame Prob Prob
-------- -------- ---------- ----- ---- ----
441 851 direct fr 3 0.71 0.69
618 851 direct fr 3 0.75 0.81
624 851 direct fr 3 0.75 0.78
687 851 direct fr 3 0.66 0.17
712 1521 direct fr 1 0.59 0.17
778 1521 direct fr 1 0.63 0.02
802 1521 direct fr 1 0.65 0.15
820 1521 direct fr 1 0.67 0.19
1581 2429 direct fr 3 0.61 0.75
1611 2429 direct fr 3 0.63 0.13
1635 2429 direct fr 3 0.62 0.03
1920 2429 direct fr 3 0.62 0.21
2531 3346 direct fr 2 0.83 0.45
2558 3346 direct fr 2 0.86 0.55
2600 3346 direct fr 2 0.87 0.18
2771 3346 direct fr 2 0.86 0.10
2777 3346 direct fr 2 0.85 0.01
3161 4222 complement fr 1 0.67 0.71
3161 4045 complement fr 1 0.67 0.71
3161 4507 complement fr 1 0.66 0.43
3161 4039 complement fr 1 0.67 0.85
3245 3346 direct fr 2 0.50 0.18
6348 7970 complement fr 2 0.52 0.14
6348 7916 complement fr 2 0.53 0.44
6348 6743 complement fr 2 0.66 0.01
6348 7838 complement fr 2 0.52 0.74
6348 6935 complement fr 2 0.65 0.10
7972 8442 complement fr 3 0.78 0.11
7972 8463 complement fr 3 0.77 0.66
7972 8319 complement fr 3 0.77 0.28
7972 8283 complement fr 3 0.76 0.02
9334 9489 direct fr 1 0.55 0.76
9486 10076 direct fr 3 0.68 0.22
9582 10076 direct fr 3 0.73 0.40
9627 10076 direct fr 3 0.71 0.20
9639 10076 direct fr 3 0.70 0.03
10043 10528 direct fr 2 0.56 0.53
10052 10528 direct fr 2 0.57 0.26
10100 10528 direct fr 2 0.59 0.35
10208 10528 direct fr 2 0.52 0.30
10316 10528 direct fr 2 0.67 0.68
10322 10528 direct fr 2 0.71 0.63
10980 11648 direct fr 3 0.66 0.50
11013 11648 direct fr 3 0.68 0.09
11232 11648 direct fr 3 0.70 0.17
11454 11648 direct fr 3 0.60 0.10
12008 12241 direct fr 2 0.70 0.81
12164 12241 direct fr 2 0.54 0.02
12234 12602 direct fr 3 0.82 0.80
12549 12602 direct fr 3 0.56 0.22
12595 12843 direct fr 1 0.58 0.13
12655 12843 direct fr 1 0.61 0.81
12691 12843 direct fr 1 0.55 0.05
12789 13067 direct fr 3 0.60 0.44
12810 13067 direct fr 3 0.65 0.75
12831 13067 direct fr 3 0.71 0.11
12933 13067 direct fr 3 0.80 0.21
12942 13067 direct fr 3 0.79 0.11
12951 13067 direct fr 3 0.77 0.29
13069 13257 direct fr 1 0.66 0.66
13099 13257 direct fr 1 0.68 0.04
13372 14940 direct fr 1 0.62 0.12
13387 14940 direct fr 1 0.63 0.05
13519 14940 direct fr 1 0.67 0.53
13561 14940 direct fr 1 0.67 0.42
13801 14940 direct fr 1 0.63 0.12
13816 14940 direct fr 1 0.62 0.01
14945 15166 direct fr 2 0.68 0.03
15171 15518 direct fr 3 0.63 0.81
15195 15518 direct fr 3 0.67 0.25
15312 15518 direct fr 3 0.74 0.55
15375 15518 direct fr 3 0.68 0.17
15414 15518 direct fr 3 0.60 0.73
15502 17244 direct fr 1 0.83 0.92
15661 17244 direct fr 1 0.84 0.45
15742 17244 direct fr 1 0.83 0.04
15847 17244 direct fr 1 0.84 0.26
17261 17839 direct fr 2 0.86 0.73
17303 17839 direct fr 2 0.89 0.71
17441 17839 direct fr 2 0.86 0.17
17615 17839 direct fr 2 0.83 0.12
18265 19128 direct fr 1 0.68 0.71
18382 19128 direct fr 1 0.67 0.00
18394 19128 direct fr 1 0.67 0.00
18595 19128 direct fr 1 0.68 0.35
19118 19522 direct fr 2 0.67 0.20
19265 19522 direct fr 2 0.68 0.06
19304 19522 direct fr 2 0.65 0.62
19515 19700 direct fr 3 0.65 0.74
19596 19700 direct fr 3 0.78 0.36
19678 19998 direct fr 1 0.65 0.94
19681 19998 direct fr 1 0.67 0.93
19687 19998 direct fr 1 0.67 0.83
19693 19998 direct fr 1 0.70 0.70
19765 19998 direct fr 1 0.76 0.62
19995 20177 direct fr 3 0.51 0.23
20174 22189 direct fr 2 0.64 0.05
20258 22189 direct fr 2 0.66 0.44
20291 22189 direct fr 2 0.66 0.13
20384 22189 direct fr 2 0.65 0.04
20756 22189 direct fr 2 0.63 0.03
22298 22534 direct fr 2 0.62 0.29
22313 22534 direct fr 2 0.65 0.14
22412 22534 direct fr 2 0.56 0.07
22488 22967 direct fr 3 0.73 0.09
22518 22967 direct fr 3 0.78 0.65
23274 23672 direct fr 3 0.87 0.04
23292 23672 direct fr 3 0.87 0.28
23364 23672 direct fr 3 0.84 0.11
23917 24057 complement fr 3 0.58 0.91
23917 24039 complement fr 3 0.57 0.78
24062 24316 complement fr 1 0.53 0.57
24062 24286 complement fr 1 0.61 0.04
24062 24100 complement fr 1 0.59 0.00
24306 24503 complement fr 2 0.74 0.60
24306 24566 complement fr 2 0.67 0.38
24306 24485 complement fr 2 0.73 0.15
24559 24897 complement fr 3 0.56 0.10
24559 24894 complement fr 3 0.56 0.04
24559 24837 complement fr 3 0.65 0.71
24559 24900 complement fr 3 0.56 0.21
24897 25088 complement fr 2 0.63 0.65
24897 25151 complement fr 2 0.51 0.01
25069 25485 complement fr 3 0.83 0.07
25069 25671 complement fr 3 0.80 0.26
25069 25431 complement fr 3 0.81 0.38
25069 25398 complement fr 3 0.80 0.05
25671 26414 complement fr 2 0.55 0.37
25671 26405 complement fr 2 0.56 0.07
25671 26378 complement fr 2 0.56 0.27
25671 26351 complement fr 2 0.55 0.52
26602 28296 complement fr 3 0.83 0.04
26602 28134 complement fr 3 0.88 0.29
26602 28119 complement fr 3 0.88 0.22
26602 27981 complement fr 3 0.87 0.18
28362 32708 complement fr 2 0.84 0.34
28362 32477 complement fr 2 0.84 0.31
28362 32471 complement fr 2 0.84 0.09
32831 33265 complement fr 1 0.57 0.26
32831 32941 complement fr 1 0.62 0.47
33267 33725 complement fr 2 0.70 0.38
33267 33563 complement fr 2 0.71 0.57
33267 33491 complement fr 2 0.66 0.06
33703 35424 complement fr 3 0.56 0.12
33703 35055 complement fr 3 0.57 0.27
33703 34905 complement fr 3 0.59 0.09
33703 34761 complement fr 3 0.60 0.45
33703 34743 complement fr 3 0.60 0.25
33703 34461 complement fr 3 0.54 0.10
35819 36136 complement fr 1 0.79 0.71
35819 36088 complement fr 1 0.81 0.25
36123 36881 complement fr 2 0.60 0.72
36123 36872 complement fr 2 0.61 0.90
36123 36866 complement fr 2 0.61 0.73
36123 36851 complement fr 2 0.61 0.59
36123 36827 complement fr 2 0.61 0.19
36123 36743 complement fr 2 0.57 0.06
36123 36455 complement fr 2 0.58 0.30
36123 36449 complement fr 2 0.58 0.31
37564 38409 complement fr 3 0.78 0.47
37564 38220 complement fr 3 0.74 0.24
37564 38211 complement fr 3 0.74 0.07
38518 39261 complement fr 3 0.69 0.06
38518 39198 complement fr 3 0.70 0.68
38518 39186 complement fr 3 0.70 0.48
39288 39530 complement fr 2 0.53 0.93
39288 39416 complement fr 2 0.51 0.23
39527 39826 complement fr 1 0.82 ....
39527 39772 complement fr 1 0.81 0.29
39527 39643 complement fr 1 0.69 0.26
List of Regions of interest
(regions from stop to stop codon w/ a signal in between)
LEnd REnd Strand Frame
-------- -------- ----------- -----
207 851 direct fr 3
700 1521 direct fr 1
1554 2429 direct fr 3
2390 3346 direct fr 2
2447 3163 complement fr 1
3161 4678 complement fr 1
4688 5311 complement fr 1
5251 5676 complement fr 3
5319 5579 direct fr 3
5663 6415 complement fr 1
6348 7979 complement fr 2
7078 7200 direct fr 1
7198 7323 direct fr 1
7525 7767 direct fr 1
7972 8508 complement fr 3
9313 9489 direct fr 1
9471 10076 direct fr 3
10001 10528 direct fr 2
10914 11648 direct fr 3
11585 11959 direct fr 2
11984 12241 direct fr 2
12219 12602 direct fr 3
12553 12843 direct fr 1
12777 13067 direct fr 3
13048 13257 direct fr 1
13251 13436 direct fr 3
13357 14940 direct fr 1
14882 15166 direct fr 2
15159 15518 direct fr 3
15481 17244 direct fr 1
17231 17839 direct fr 2
17763 18272 direct fr 3
18244 19128 direct fr 1
19106 19522 direct fr 2
19512 19700 direct fr 3
19672 19998 direct fr 1
19989 20177 direct fr 3
20147 22189 direct fr 2
22268 22534 direct fr 2
22425 22967 direct fr 3
22965 23672 direct fr 3
23917 24072 complement fr 3
24062 24331 complement fr 1
24306 24584 complement fr 2
24559 24906 complement fr 3
24897 25154 complement fr 2
25069 25680 complement fr 3
25671 26456 complement fr 2
26326 26604 complement fr 3
26602 28383 complement fr 3
28362 32828 complement fr 2
32831 33280 complement fr 1
33267 33731 complement fr 2
33703 35853 complement fr 3
35819 36163 complement fr 1
36123 36884 complement fr 2
36874 37461 complement fr 3
37564 38520 complement fr 3
38518 39348 complement fr 3
39288 39533 complement fr 2
39385 39624 direct fr 1
39527 39898 complement fr 1
POSSIBLE SEQUENCE FRAMESHIFTS DETECTED
From To
Frame Frame At base...
----- ----- ----------
1 3 24060 +/- 11 bp (complement)
3 2 26400 +/- 11 bp (complement)
>Translation: 441..851 (direct), 137 amino acids MHCDIAVLDDVVVFENAYTNEGRNKVKSQYSLLSSIEGSEAQEWVVGTRYHPKDLYSDLM GMEEDIYSKEGELVGKENIYEVMEKAVEDNGDGTGEFLWPRQLRKDGKFFGFDVQILAKK RGQYLDRVQFRAQYYQ* >Translation: 820..1521 (direct), 234 amino acids VFSLEHSITNDPTDPDSQPIAYEKFQYYDKKHLTRDGGQWFYKGQKLNVSAAVDFAYSVS KRADYTAIVVIGVDSENNVYVLDIDRFKTDKISEYFRHILDLLNRWDFRKLRAECTAAQS AIVSELKDNYIKPNGLALKIDEHRPNRHQGSKEERIAAILEPRYDNLQMYHYRGGNCQVL EEELVSYNPAHDDCKDCLAAAVEVAVKPSSAVKRKRSQDNNVVFHPKFGGVAF* >Translation: 1581..2429 (direct), 283 amino acids MAGTTIDIESMIDPHSLAVEIANRWTSWNNARSEKVKEWKELRNYIYATDTRTTSNNKLP WSNSTTTPKLTQIADNLHANYFAALFPQKRWFRFEATDADSDTKIKRSIIQAYMQNKLRQ SDFVNTTSKLVNDYIQYGNCFATVDFERKVTKYEDGDRIVNYVGPKVVRISPFDICFNPL AANFSDTPKIVRSVLTLGEIQRMVENDSSKGYMADIFNKMLGNRGSARGNEVDINKSEGF VADGFASLTDYYESDYVEVLTFYGDIYDKVRVSSLTTVSLLL* >Translation: 2531..3346 (direct), 272 amino acids MGPLDNLVGMQYRIDHLENLKADVFDQIAYPVLKIRGDVEDFDFEPNARIYLGDEGDVGY LVPDSTALNADFQIQNIEAKMEMMAGAPREAMGIRSAGEKTAFEVGQLMTAAGRIFQHKT AHFERVFLEPILNAMLETARRNMDYEDTAKVLNEDTGLYFFTQITRDDIKANGKIVPMGA RHFAERAQRVQNLTTMYQIKASDPTVAAHLSGKEFARLLADELGEPALFKENVSVSEQMG KTVFTVVMRWVVGNKFLFQNLTVTTTVVIHL* >Translation: 3161..4507 (reverse), 449 amino acids MVAYRVAWELTKNPTLRVLYISATSNLAQKQLSFIKNIFESDIHQKYWPEHLHKDESKRE KWTTSEIALDHPDRKKEAIRDPSIFTGGLTTSLTGMHCDIAVLDDVVVFENAYTNEGRNK VKSQYSLLSSIEGSEAQEWVVGTRYHPKDLYSDLMGMEEDIYSKEGELVGKENIYEVMEK AVEDNGDGTGEFLWPRQLRKDGKFFGFDVQILAKKRGQYLDRVQFRAQYYNDPTDPDSQP IAYEKFQYYDKKHLTRDGGQWFYKGQKLNVSAAVDFAYSVSKRADYTAIVVIGVDSENNV YVLDIDRFKTDKISEYFRHILDLLNRWDFRKLRAECTAAQSAIVSELKDNYIKPNGLALK IDEHRPNRHQGSKEERIAAILEPRYDNLQMYHYRGGNCQVLEEELVSYNPAHDDCKDCLA HLFTDRYVLFEECWLTKFVCKKTGKLFA* >Translation: 4688..5254 (reverse), 189 amino acids MTLHLENISFVAVPKTATIAIEKAFSPYARGYTPHTHEPVNVVKRDGGQDCLGLIRNPHD WIKSYYLYLKHSPYFYSASSAWGIGEKTFEEFVGRFCDGHRLWPEPMRLQSMYLLRNGVS TDFIYRFENLLDAVAHLGAACGQMPKMSRHNVSPKCDVILSKKMTYLFEDAASEDFDLYE SGADGVMT* >Translation: 5251..5661 (reverse), 137 amino acids MKYKSARYINSTKIDCEIEHPVHGWIPFTCDPSDAGSEFDVAALHAEMAANPETLPYVPP TEAEILYEQTSEARYYRSQLLTEIVDPVATNPLRWDDLSQERKDEVSAYRRALLNITDQA GFPSDIVWPEVPSFLA* >Translation: 5663..6256 (reverse), 198 amino acids MLEVTSDGSMVYQRYTTYNSVHTVYVRTYYSGTWYNWAKQWDNLNDGSGSGLDADLLDGQ QGSYYYPASNPNGYTAYTNSDVDTHLNTGTATTDQVLSWNGTDYDWIDGGGAPPTDLHAV GTYTVACTGVNVAQGGTTAGSNLRYRNIYALDRFTVLTTTSSTVTLTGTWRNVGGPVQYV SGRGGGQRGVSLWVRIS* >Translation: 6348..7970 (reverse), 541 amino acids MAKKPTVTTLQSGFNSTEVLNENFENIRDAFDNTLSLDGSTPNAMQADLDLNGNNLIGAT GLLINGTDYLADVEAAKAAALVAQAAAELAENNAETAEVNAEASETAAGLSATAAATSAT NAGASETAASASATASATSATNSATSASQAATSASAAAVSEGNAATSETNAANSATSASG SASTATTQASAASVSATNAATSASNAATSATNAAASQAAAATSETNAAASESTVTTSATN AATSEANAATSASTATTQATNAATSASTASTSATNAATSETNAASSASSAASSATSAQAS KDAALAALDSFDDRYLGQKVSDPTLDNDGNALVAGALYFNTTDGIMKVYDGSVWLAAYAS LSGALIATNNLSDVLDVTASRTNLGLGTAATTASTDYATAAQGALAVSAVQPNDSPSFGS VTVTGTVDGRNVAADGSKLDGIEAGATADQTASEILTSIKTVDGSGSGLDADLLDGIHAS SFLQGNQTITLSGDVSGSGTTSILVTVADDSHNHIIANVDGLQTALDGKWSKGADIGGGC * >Translation: 7972..8463 (reverse), 164 amino acids MAKKPSKMWFYETTLPDTRNEFTNYSLKKKDHKVGDKTYLSLHKIYIEMEDPTEYEFALS VFGDYSVWENLCNLSWFKTHHVQMQKELMLKLKARTIRNMINDLEEGKASYNAQKYLADA GYLDNGSKKRGRPSKDELDGALKQAALEKAETEDDATRIGLMN* >Translation: 9334..9489 (direct), 52 amino acids MHKYTVTVYDELEGGVDVLTVEAKTIDSVIYIVESNPKHEYEIIEIERLDQ* >Translation: 9486..10076 (direct), 197 amino acids MTNHVRNILKLYRQATQEDTINGVEWYARAERMAKAIASDAGLPLPTVIGVMAALSPNNR WERNCRDAATMCKAWQNGDSMDSFKVSCYNTMKAKAWAILDLGLTDDEDILSHLNGQKIR SFYSNIRGLDEVTIDGHALNIARGKREGLTSDKTNMGKREYRELQAAYVRAAKRVKVKPH VLQAITWTTWKRVHNI* >Translation: 10100..10528 (direct), 143 amino acids MTNTQHKNILKHLKTAKGLTVREALIEYSISSLTKRVHELRGLGYDIESVRKKHPCNRSK IYTLLSTRGARAMSMCGEIENTENAIKSLRAKEFNIQFNSIGLTDKERLTIVNTIREELL EETVRLNKLLELANKAEGSHRA* >Translation: 10831..10980 (direct), 50 amino acids MLPVTLEEHLITMGLIPLSSFEELDTVVNPTGQEEDLPAYNEETQEYMF* >Translation: 10980..11648 (direct), 223 amino acids MTQIEATYIDHMGSDLSVVNAARVSFGKKSEWVYCGQSDGRDKGLSGRDTKLIKYLAKHK HISPFGHAFASFHVKAPIFVARQLVKHKFLRWNEISRRYVDDEPEFYTPDVWRGRSADKK QGSDGVVNPEYNPQYLDNKIKFAYLQALDIGISPEQARMLLPQSTMTEWYWSGSLDAFAD MCRLRCKEDTQYESRVVADQISEKMADLYPVSWAALMEGEKQ* >Translation: 11645..11959 (direct), 105 amino acids MTNRKFTPPTEFPAEYVDGFGCKVTILGRSYYNKERPLVGFDDEGCACNYAENGAYWPDD GGKYDLHDIQKRITTWHNVYEGWVGASNKVNRGVTENRLCVIPH* >Translation: 12008..12241 (direct), 78 amino acids MTDGNTYAINKHLDEREDYDALQEVTAELERAEARIEELEKELAGARADWFQMVFRAIDL KKEVSTTLAELKGKTDE* >Translation: 12234..12602 (direct), 123 amino acids MSEAPERIWAWWDDAYDVGLLNKHGDKRYTPNDAKEYVRADRIEELETQLSEARQVGKEW FEEQKKARKDANAAEAKLAKAIDFVAGVAGGFKFGESLVDWANLHVLKARTLLAELKGET DE* >Translation: 12595..12843 (direct), 83 amino acids MSDYKQTSYAAGIITSRYSDMLKRLGDDYEDEMVVVSLMKYYNLCLDNDDPTILEAIERV LEDYMCTADYSAWLLGRNKCLP* >Translation: 12831..13067 (direct), 79 amino acids MFTVEFEPECSVITCLDNHDAFDDVEVVVCEDNSVFIVQHMLDVDDTNIIYMSYQQLTEI AAALDMPEGAYILGNKGD* >Translation: 13069..13257 (direct), 63 amino acids MIYGLYVFAIMYSLGAILLLAITEAAEEDNPNADLNLALLWPYIAVRVILERIVNGPYKD DE* >Translation: 13387..14940 (direct), 518 amino acids MDYEHKKHQPCQSCGSSDGAYPYEDGIYCHVCKTKTFNDDGDTQVTEQKTLPPIRGKIMA VPSRGLNKATAEKYRALTSDDKISLLYTTEGKVTSFKERGLSEKTFKFNGPAQTDLFGQS AFSKGGKSVTITEGEFDAMAAYQMLYMSEPCVSVINGSSGAVKDCKRNYEWLDSFEKINI AFDNDKAGQDAAMAVAELFDPRKVRLVTMTLNDPNDYIKQGRERDFIDAHKKAAPFTPDG IIAGSSLYDLVSTPPEYDCVPYPFSGLNRMTKGLRTGELITFVAGTGVGKTQVMREILYS LIQQDKGNVGTLFLEEPVRDTGLGMMSIQAEKPLHLTDTIYTKEEFDNAYENTLGTGRVF LYDSFGSNSVERIVSMVRYLARSCDCKFIILDHISIVVSDHAKDERKALDEIATKLKTLT VELDICLLMVSHLNRDKNRKPPEEGGTINLQDIRGTAGIGQLSNIIIALERNTQADDELE RNTTRVRVIKNRFTGETGVADSLSYSRHTGRLKSYEG* >Translation: 14945..15166 (direct), 74 amino acids MEDRYYQATGYVALSSVGGVWDEVGEPCETLEDCQEVLQEYKDGIDEYGEEPVYFDIPYE KYRIEYRTVKVVG* >Translation: 15171..15518 (direct), 116 amino acids MDLWDEYGMLKREFNTSDLSDGNYCLRIEGETGNLYVFDKRDNSVVHVWEGFFWNWLWIQ NDSDDFHKMQHFSYLAGYTHAMLDMLYEVEDLDEEQKLDIRDLIKEKSLTYGSSF* >Translation: 15502..17244 (direct), 581 amino acids MEVVFDIETDALDATVIHVLVAKRVGQKGFYVVRDAETFKRLAKQVTLWIGHNVIGFDIP QIKKLWGYGIPLKDVADTLVMSRLLDPTRKGGHSLDALSGNEKIDFHDFSTYTPEMLAYC KQDVAINEKVYLQLKEELSNFGKASIQLEHQMQAIVCEQEKNGFMLDTDIAEEIYTTCLR ETNRIEAEIKEFMVPIAVPVKEVIIKRKKDGSIYSNQLLEGCNVQGDYTKIAWEEFNLGS PAQVNKRLDRLGWKPTVKTKSGNSYKICPENLATIPDTAPEAVKGLKAWKVLETRWKLAQ EWLQKSQETGRVHGRVILTGAVTHRAAHQGPNMANIPSVPHGKDGILWKMEGMYGAECRQ AFKVPEGKLLVGTDAAGIQLRVLAHYMNDPIYTEQVIDGDIHTFNKEALGRYCKDRPTAK TFIYAFLLGAGTGMIASILGCNNRQANEAMANFYEAIPSLKKLKSQASQAASMGWMKGLD GRVLRIGSDHLALSVYLQGGETVIMRLANVFWQRQAKKEGINFKQCAWVHDEWQTEVDED QAQRLGEIQVQAIKDAGTFFKLNCPMDGEAKIGKNWLETH* >Translation: 17261..17839 (direct), 193 amino acids MYNNQTDQRHKEINMADKKIVLKNVEVSWAKLLEAGLKYKSETEYEFSVAVKANDQLRDL MKSFKLNKQFKSKDSTFDGEEFIQLTLDTRTKSGWVRHGEVFDEFGDPTKDLIGNGSKMN LFVSIGQSSYGNIIKLGHLEDMDMESKEMMFHFGQVMELVPFEAPSAVIKKEKEINESVE AMAEDEMEIPFG* >Translation: 17832..18272 (direct), 147 amino acids LVDYLVTKKGDELEGLSLPLHSIEEEGVVLLYDGDLFLYSHDDVEEDHYADQGPLPEDAE ARKNIPVYSGFFKYFPDAIVAVSHLSLIGGIQHGQTRETLHWDRSKSTDHTDALLRHLLE EDWAAVAWRALAQLQKSIEEERKYDD* >Translation: 18265..19128 (direct), 288 amino acids MTEETKSIDTLIDDIYSVFTDGYSKSPDNEKLIDAFGEAMKGLMRSRLTPRESSGGTLRL SAIGKPARQLWYDSRGVEKPDFTGDQLLKFFYGDVIEEVLLTLAKLSGHSVTNEQQKVVV AGITGHMDAVIDGHVIDVKSASATAFKKFDQGSLVFDDPFGYMHQIAAYSEAVEGNKGSG FLAMNKVDGKLTLFQPDPDFLPDTQERVDYLKEALASDTPPERCYEEVTETNGNKKLPMG CAFCSFKKECWKDANDGSGLRGFGYSFGTVYLTHVEKAPRVGEVDVE* >Translation: 19118..19522 (direct), 135 amino acids MLNSKSSTRKRALKAGYRSGLEEQTAKDLKKRKVLFTYEETKIKWLDSKVRTYTPDFVLP NGVIIETKGRFVAADRRKHLEIQKQFGTLYDIRFVFTNSKAKLYKGAKSSYADWCNKHGF LYADKTIPEDWLNE* >Translation: 19515..19700 (direct), 62 amino acids MNEDLVTRIVDRFSIAELAEVVGITPRMFIDAFEDEILDNLTALADIDQGFVIEDDDDEY E* >Translation: 19693..19998 (direct), 102 amino acids MNDYQQQAVETAIYPSTAQVTYPAMGLANEAGEVLGKVKKIIRDGTFNRDDIADELGDVL WYAAALARDLNTDLSAIAQRNLDKLASRKERGTLKGSGDKR* >Translation: 19995..20177 (direct), 61 amino acids MTWFWRYINYLATWREHRKVIKQLNKFSDRELRDIGITRGDIDRLVWLKEDKDASGRETK * >Translation: 20174..22189 (direct), 672 amino acids MNNYQEVSTRAEVVTRRTYNRPLNDEGTVFETWEQTVDRVIDHQRWLWERQQRAELNEKQ SAELTELRQLMLDRKATTSGRTLWLGGTDVAKKREASQFNCSFGNVETVHDVVDAQHLLL QGCGVGFYPSVGILSGFTAPVEVQVVRSEKQKSDPKGAEDNVEAFYQEDGKSVWEVVVGD SAEAWAKSFGKLVAMKKRVDIIRLNYREIRAAGMRLKGYGWISSGDSDLSVAQTAICGIL NDRAGQLLRHMDILDLLNHMGTVLSSRRSAEIAVLPVTNPEIDAFISAKKDFWLHGNEHR QQSNNSIMFDTKPTKWELSYIFDKIVEAGGSEPGFINAEAARKRAPWFKGVNPCAEILLG NKSFCNLVEVDWGKFLGDHGGLERAVWLAARANYRQTCVNLDDGVLQRSWHELNEFLRLC GVGGTGIVKFLDHYTGRNNVASMLQSLRAQAHKGANSMAEEFGTPMPKAVTTVKPSGTLS KIMDTTEGVHKPLGKYIINNITFSKDDPIIASLEAAGYKVFDKPFEPSSKLVAMPVCYDD VSFDEVETDRGTVHVNLESAVEQLDRYKLLMDNYVDHNCSVTISYDPSEVPAIIDWILTN WDTYVGVSFIYRNDPTKTAEDLGYAYLPQEVITEEAYVAYTSQLKPLDLSGLTSDDDLVD EACATGACPIR* >Translation: 22298..22534 (direct), 79 amino acids MQKYIMLTQDNCKYCTAALGLLESLGHKVEVYDVQDENMSLVVNMLRVTNTVPQLYAPDG QFIGGYTELKEYLNDSST* >Translation: 22518..22967 (direct), 150 amino acids MTVVRKQFDRALYEAYDTPARDALVGYLELKGHIIVNNEENFNVDVVSQKGGYTYFNEVE VKTAWKGDWPTHWSEIRIPQRKQRLLDKHVDDGKSVLNFYIFRPDFKQAWRIKDTLLTQE SLKEAKGRYIQKGEKFFHIPFTQAELIKL* >Translation: 23274..23672 (direct), 133 amino acids MPWALPVLDVLEKHLGKGAVETGIKNGNIEMAPLALMRGRSFDNAFIIVDETQNISTHEL KMLLTRVGEGTTIVLNGDAQQSDLKEADGLSKVIHLAKKHQLPVPIIEFGVDDIVRSDIT AMWVRTFLKEGL* >Translation: 23673..23861 (direct), 63 amino acids MFTAIILMCTLDGGLCRAVAHPVVVNDLISCTLLLGEGVKKVEEQAGWKVASYRCLPWGE PT* >Translation: 23917..24057 (reverse), 47 amino acids MDNKATMGVLFAALLALLGWNISTTHELTLQVQKLEIILLNDAFSK* >Translation: 24062..24316 (reverse), 85 amino acids VPSKRLDKDKMKCNKPRTTPDHPTKSHVVKACDNGKEKIIRFGQKGVKGSPDGTPRNKAF KARHAKNIKKGKMSAAYWADKVKW* >Translation: 24306..24566 (reverse), 87 amino acids VADNQWHLSKSVPVTFILAIVMQTIALVWFVASLDSEIESNTRELVRHETRLIALEASVQ AQAVAMARIDENINAIKGMMERDRAK* >Translation: 24559..24897 (reverse), 113 amino acids MVRFIVCLSLVLFLGGCLNPMSLLGGGGPNVAANVQAGAENNQTGVQVGDITKAETVYSG VAPSGSVGSLNISNQDIPIWVILLLILGWVLPSPQEIWRGFLKTITLGKYRG* >Translation: 24897..25088 (reverse), 64 amino acids MRVQKRKKFVEARKGGNAEDALSVLFSAGPVEVASILAYAKQEELKEKGKPYETEMVINL GKL* >Translation: 25069..25671 (reverse), 201 amino acids MASSWNLAAAQTSSAVEDVASSGTSLWQSVVDGAAEALASGKEAIIDVAEDVYDYLPEQE DVMDAAATGVEAAGSVLPAIMDTAQAAGEGLMGSGLSEFRFLGSNFFDAGGKFTEKDLNV SDISALGRAVKKAKAEGRSNVDYNDFGTAEGEVLKGGILAGVFDPDLRMARTVGGFKFEE DAEGNTILRNTYNFNEGPKT* >Translation: 25671..26453 (reverse), 261 amino acids VVKKIHLLSKGPQMKKVSISITVYLVVLILLIPQMEKLTESLNMTSAWNKGQTLSKDMPD YKPELLNLSSYQAKASPSTGGATYQAGAGTTPTSATSGITALQPTSTTQTTLRKVEAQSY DTLYGNFERQDTPFKDVSVSSMTIGELADFSRASGEYGRYVKPRLPKNTYAYKKGLTSTP MGKYQIVGSTLRDLTRRMNLPADTVFNKETQDKMFLFLAKEAVGGGKTSSEKRSRLRGIW EGFKHVDNNTLNKVIAEIEQ* >Translation: 26602..28359 (reverse), 586 amino acids MAFTLDQNVSGAASAPQPVQSMSGTSIAASALGGLLGAAERSAKLRAGSGPTQTDRNNAV FVENLRNVNQDLASGMSPDQVASKYGATFANLSLNSEQKAVLTKTIGEDIFYVPKQVETP VDTATEMFNNTDETVRLGLIDIETKKAEAEGETISQDVAAERARNNYAAFQVAANAGILQ GNIDFSTGFDQNMKTLDSFIKAVSAGLQVEQRGENLSLETLRQLQDGFLLLKSNPSFQKP TGKAALEQWALMETRLQSIEDVFTRLEDYDAKGATAKAKQLMGVISLSGKSPLSALAAKD SDFMIKMAATIADDITADLANMGEIPEVDHSALNFDPVILELMGVAPSGQQTGDVPEGGF DIPPSPFPTELGEKYEGMKIVEKAKFRAYHRSAITGLEAGSLDSPEAINAYASSVTALSY DLTQNDKPSSQNFDVLFSNRNIARVNALQAQGGEAGRVAGNLRAQMGAALQHNQARYGVL AAGLVSRIPQVKIDETNGKFTLDVKDDPVLQEIAAVVSVYYGGDFEALWAEGGTAKISLK NRLAREGKITPDSPEFERFDAATKVLESSLWKGLASRYNTVRGIP* >Translation: 28362..32816 (reverse), 1485 amino acids MDSIASFEELEGGLEEETTQSKSKPIDPNSPLEIETVEAQAYLLDEDPQVISETRANQDF THEGLAKQYPDLTRYLDTLYEAGVSVEEAGRLAREHVERKAIAVAPQEFIFSSMLMVDDE TVNPESLRVLTNYEKISSRISKRLEENDPSTFKWLTAGALNTARDFTVGVLEMAIRRDSS LSQKYADSLFMEEDEFNDFWDKEIADAEAKGLFNIREYESLKELQALVDNFGTDTDAGFN QLLALADIATLGGTKTVGRLASAGVKKAATGTRSVVSDLLASKTVSEAVTATKGIAEGGK ATVKQLNSARPSPAVAYKAGPSTMDPKPSVNTPSAAVVTEGTKRSMLFEKMAEMLSSPFA GKTFTTKSLAEATTEVADRLVAQSTNAFVKVSRRRAEGSDNYIYTALLGKADTGKPFTTK AAAMKAVKDDPRYKAVRLNSDRTKAFGVDEDKRGWYLEYSERVDTSRLATEIEDVNVEEG FLKRSAASLFSAGQTALGPRLGFMLNAAEGLVARVSKEADVAFKDISKLSKGESEELNKI ITSYRDSPLGDTELDLAAQRGAPSSAKFEQDFMAVNGRVPSEQQMKAYRALVDFNNSSWN VKATEILKKVTERGGWTVDVSEGYTTIGVPVTVADDAVVFSRLQGSVRGSAVGDRIVYKL DEPFEDANGNFFEYVTDVADARVPQKSDVLGYNFGGSRNNETTNFFVGTLFDVEFAGGKK GKGGFRSLLGSYSSKEATSAARELNNIQETIGGFLKATGLKSISKLELSGEDLDRVNDII SRNNKWNPSVENFDDLKDLSQRHKESFANKFEVKRRDQQVDTEITDGYGLSVGDYQSRRV ARKRGDAPLMEYGGGRVSNQDPITNILEQFQSTAYRYTHSKATQAAVNGWVDKARRMGNV TFDGPVPSDPNDFLRRAKIKGSEGVDADMAEQQAVIKRRMGLEERTDKENNFFIRMGQHI YDEGVFMGKGKGIKTNPEDWLDGAAGRVRAMVFHMKMGIFNPDQLVLNASHVAQIMAISP KAGLKATAAVPIIAQLMRKTSKAAAKDIDALYANGFAGMTKEELLATVKYMRESGRDIVG TSVLERSGTAFDPKKNAASEFLELGLTPYKMGELFGRIASVATAVVEHNAKKISDDVFSE AGLQYVANREQVLSFRMTSGQKGAYQEGAIMGLATQWMSYTNRFVDNILIGRDLTKAERA RMVGVNTVLFGTRGMGFSPKMTAALVAFGVDPEDENSTATLNAVKFGLFDFMLSQLVGED VSLGSRIAPMGGIVQQYSELFREDPLYATLGGPSAQIGFDTYKAIKATLETITGGHKQIA VEEFKVLMRNVKSVDIYAKVVELIETGEYRSKRRGLAGEFDEVGTGLAASVLGGATPMKV LNHYDAKDISYKEDAKFKDARRRIDTWATKALDLISTGEPDKMKQGRELYNDAMNLIEDG GFSEENQTKLYRAVVNLETMTDLVKRATGQSKASQLTAKASQGE* >Translation: 32831..33265 (reverse), 145 amino acids MVAVTGTVLAIAGTTAGIVGTVKAGKAARRSARAQQQAQEVQAKRQRRAAIRSNILASAR AKASAQAAGTSQSSGLSGAIGAGRSQLGAELGFGSQLSGLSANISKFDMQAQTYGDIAKL GFSAAGNAPTIGGYAEDLYGFFKK* >Translation: 33267..33725 (reverse), 153 amino acids VLKTTATKIRTATPDDVFDILILAKEFSKEAPQSHKWNKEKTEQFILSALQNTNMTIFVI DVDGEIEGALVGLLSELYMSYTVQATELAWFVSKDYRGKPASLKLIKAFEKWAKESGAKQ IGMGDIEGISSLEKLYNRLGYERAETVYLKEL* >Translation: 33703..35850 (reverse), 716 amino acids MPQSLTQRTVNTFIKGLITEASELTFPENASVDELNCSLGRDGTRRRRKAVTLEDNHVLS DVVVPEGALVQTLDWYNVAGQVNLEFLVVQVNNILYFYEKSTDPLSANKYSGSVDLNTHS ASNNLSPSEERVQVTSLNGYLIVASPAINTFYLGFNTSTEAFTATSISFKERDFEWQGSD VDVTSLYFGEGTSVSNQRIYDTYNVGWVGPKGSAALNTYGSYIVYPALTHPWYSGKDANG AFNKADWLEIYTGSSLASNGHYVLDVFNKARTGLTTEVETGRFRSVAAYAGRVFYAGIDS AKNGGKVYFSRLTERMSDVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDAHNIRKLHVLGA SLLVFAENGVWAVAGVDNVFRATEYAITRISDVGLSNENSFVVADGIPIWWGKTGIYAVQ QSENLNTPTAQNLSLSTIQTLWNNISNAKKAQVTVEYDKINQRVFWFYPDNDESVDYKYN NILVMDLALQAFYPWRVEDEASSTSYIIGTSYYGGLGSTSTETQVVNGADVVVNGSDNVV ATLYRDYLEGDSEIKLLVRDGTTGKMTFATFRGDTYLDWGSADYKSFAEAGYDFMGDITT FKNAPYVTTYMRVTEDGYVASGAGYEFINPSSCLMSVSWNLSKSGSTPREIYKLKDVPVV NPNDLSSINYPTDTVVTKSKVRGRGRSMKFRFESVAGKDFHLVGYEVIGAKNNSY* >Translation: 35819..36136 (reverse), 106 amino acids MAEIEVSKSEDGQTYVVKSDKTEKALVVYKPQDGFKFYAVKYENGAPLPAGLQGSWTGAA GALAAVKLHLAHKKPTARKAVNDRAKERQAEKEKLNATKPDPENG* >Translation: 36123..36872 (reverse), 250 amino acids MKMTLLEMVQNILSDMDSEEINSLVDSNEAEQIAKVVENTYFAMIATRFIPEHSQTLKLT SFSSSARPTHFSFPTRVKNIEFLDYNVSKAVGGVEYRRLKYLSPDEFFGLSDGRDSLASN VKQVADVGSDSILLIRNDAMPMYYTSFDDDTVVLDSYDASVDAILTSAKTRAYGVKYPTF DSFSDTFVPDIDDTMFPFLLAEAKSTAMSLFKSGADPKIEQTARRQKVYVQNDMHKVNTG RAKNNYGRN* >Translation: 36874..37446 (reverse), 191 amino acids MANVEHSSLTGSALHEPKGTATANSGEVYVANGSGSGTWQPIHRHLGAATAFSSTSPYAY TIDTDTVEKFLSFPVSSSHVEGFTVLTSPNLRFRYDDPTEITSLINVTMSSSQAGGVGHA VQWALFKNGVEIVGSRAIRTISSGSWGSISVTGVTTLNQNDYIEIKTKADADNVDVNYAN IYVSIIGMSA* >Translation: 37564..38505 (reverse), 314 amino acids MAGNTVATLALAKRAEVWSAELKEILRDELQGMKYVKWLDQFPDGDTFKIPSLGDATINN YSEDTAVTYDPIDDAQFTFSITEYLQAGNYITNKAMQDVYYANEIMSQFVPIQERALMER LESDIMALGGQQTVDNANTINGVDHRMLGSGTGGKIGVADFAKANLALKTAKVPQKNLVA IVDPSVEFELNTLSQLTNVSNNPRWEGVVRDGIATGMSFIANIYGFDVYTSNYLKTEAAE TIGGTTVNNAITNMFFSADQAVLPFVGAWRQMPEVDTEYNKDFQRTEFVTTARYGLKLYR PENLATVMTAPLA* >Translation: 38518..39285 (reverse), 256 amino acids MSVFSEEQVTPATQSEQVSSFEEPTSPSVVNELVGEGRKFNDVEALPKGKLEADRFIEQM KQENAALKADLEKQAYRLGVTEHLKETASASTAELSDPNNNIGGTADVANTKPSSSEADI ESLVEQTLRKREQESVAKSNIALVESEREKAYGTEAAATVQQKASELGLPMAELQSMAAK SPAAFMQLMGKPAPRSNPLVQGSIRTEGSTMQASSERDFGYYQRLRKENSSLYYKPSTQR AMMADADRLGDNFYR* >Translation: 39288..39530 (reverse), 81 amino acids MKAAWFKDCKSKKEKEAVAQTLQSNRDSLDRLKEILEPMLKETTPAADYDSPSWAYKQAD RNGFNRAVTTVLDLINLDKE* >Translation: 39527..39826 (reverse), 100 amino acids MGARHFAERAQRVQNLTTMYQIKASDPTVAAHLSGKEFARLLADELGEPALFKENVSVSE QMETQKVATEAQIEFEAEQEEMVDQGSQELQPAPEEPLE*